{"referenceSetId":"GRCh38","metadata":[{"id":"CIEND","info":{},"description":"Confidence interval around END for imprecise variants","number":"2","type":"Integer","key":"INFO"},{"info":{},"id":"CIPOS","number":"2","type":"Integer","key":"INFO","description":"Confidence interval around POS for imprecise variants"},{"description":"Source call set.","key":"INFO","number":"1","type":"String","id":"CS","info":{}},{"id":"END","info":{},"description":"End coordinate of this variant","type":"Integer","key":"INFO","number":"1"},{"id":"IMPRECISE","info":{},"description":"Imprecise structural variation","type":"Flag","number":"0","key":"INFO"},{"type":"String","number":".","key":"INFO","description":"Merged calls.","info":{},"id":"MC"},{"description":"Mobile element info of the form NAME,START,ENDPOLARITY; If there is only 5' OR 3' support for this call, will be NULL NULL for START and END","type":"String","key":"INFO","number":"4","id":"MEINFO","info":{}},{"id":"MEND","info":{},"description":"Mitochondrial end coordinate of inserted sequence","number":"1","type":"Integer","key":"INFO"},{"number":"1","type":"Integer","key":"INFO","description":"Estimated length of mitochondrial insert","info":{},"id":"MLEN"},{"description":"Mitochondrial start coordinate of inserted sequence","number":"1","type":"Integer","key":"INFO","id":"MSTART","info":{}},{"description":"Difference in length between REF and ALT alleles","number":".","key":"INFO","type":"Integer","id":"SVLEN","info":{}},{"info":{},"id":"SVTYPE","number":"1","type":"String","key":"INFO","description":"Type of structural variant"},{"id":"TSD","info":{},"description":"Precise Target Site Duplication for bases, if unknown, value will be NULL","type":"String","key":"INFO","number":"1"},{"info":{},"id":"AC","key":"INFO","type":"Integer","number":"A","description":"Total number of alternate alleles in called genotypes"},{"number":"A","type":"Float","key":"INFO","description":"Estimated allele frequency in the range (0,1)","info":{},"id":"AF"},{"number":"1","key":"INFO","type":"Integer","description":"Number of samples with data","info":{},"id":"NS"},{"description":"Total number of alleles in called genotypes","type":"Integer","number":"1","key":"INFO","id":"AN","info":{}},{"info":{},"id":"EAS_AF","key":"INFO","number":"A","type":"Float","description":"Allele frequency in the EAS populations calculated from AC and AN, in the range (0,1)"},{"id":"EUR_AF","info":{},"description":"Allele frequency in the EUR populations calculated from AC and AN, in the range (0,1)","number":"A","type":"Float","key":"INFO"},{"description":"Allele frequency in the AFR populations calculated from AC and AN, in the range (0,1)","number":"A","key":"INFO","type":"Float","id":"AFR_AF","info":{}},{"number":"A","type":"Float","key":"INFO","description":"Allele frequency in the AMR populations calculated from AC and AN, in the range (0,1)","info":{},"id":"AMR_AF"},{"description":"Allele frequency in the SAS populations calculated from AC and AN, in the range (0,1)","key":"INFO","type":"Float","number":"A","id":"SAS_AF","info":{}},{"number":"1","type":"Integer","key":"INFO","description":"Total read depth","info":{},"id":"DP"},{"id":"ssID","info":{},"description":"dbSNP ssID of the allele","type":"String","number":"A","key":"INFO"},{"info":{},"id":"TRANSFORM_TO_DIFFERENT_POS","number":"0","type":"Flag","key":"INFO","description":"The transformationm for dbSNP results in different POS for the alleles on this line"},{"description":"Is Assembly specific. This is set if the variant only maps to one assembly (dbSNP flag)","type":"Flag","number":"0","key":"INFO","id":"ASP","info":{}},{"info":{},"id":"WGT","number":"1","key":"INFO","type":"Integer","description":"Weight, 00 - unmapped, 1 - weight 1, 2 - weight 2, 3 - weight 3 or more (dbSNP flag)"},{"info":{},"id":"RV","number":"0","key":"INFO","type":"Flag","description":"RS orientation is reversed (dbSNP flag)"},{"id":"WGT_ref_RS","info":{},"description":"rsID to which the remapping of INFO flag WGT relates","type":"String","key":"INFO","number":"1"},{"type":"Flag","number":"0","key":"INFO","description":"The REF cannot be resolved between builds","info":{},"id":"ERR_REF"},{"number":"0","type":"Flag","key":"INFO","description":"The REF matched the - strand in GRCh38","info":{},"id":"MATCHED_REV"},{"type":"Flag","number":"0","key":"INFO","description":"The REF matched the + strand in GRCh38","info":{},"id":"MATCHED_FWD"},{"description":"The REF and ALT have switched between GRCh37 and GRCh38","type":"Flag","number":"0","key":"INFO","id":"SWITCHED_REF","info":{}},{"description":"The REF has changed to a non-PHASE3 ALT","type":"Flag","key":"INFO","number":"0","id":"REF_SWITCHED_TO_NON_PHASE3_ALT","info":{}},{"description":"dbSNP has different POS for ALTS on the same line","type":"Flag","number":"0","key":"INFO","id":"ALLELES_DIFFERENT_POS","info":{}},{"description":"An ID has been missed in remapping","key":"INFO","type":"Flag","number":"0","id":"MISSED_ID","info":{}},{"key":"INFO","type":"Flag","number":"0","description":"An ALT has been missed in remapping","info":{},"id":"MISSED_ALT"},{"info":{},"id":"NO_RS_TO_MAP_TO","number":"0","key":"INFO","type":"Flag","description":"The rs cannot be used to remap"},{"id":"GT","info":{},"description":"Genotype","key":"FORMAT","number":"1","type":"String"}],"datasetId":"6e340c4d1e333c7a676b1710d2e3953c","name":"1000 Genomes phase3:GRCh38","id":"1"}