--- - description: ~ display_name: BRC4 Community Symbol name: BRC4_Community_Symbol release: 1 - description: ~ display_name: BRC4 External Description name: BRC4_External_Description release: 1 - description: ~ display_name: BRC4 RNA Description name: BRC4_RNA_Description release: 1 - description: ~ display_name: Ribosomal Protein Gene DB name: Ribosomal_Protein_Gene_Database release: Dec.2010 - description: ~ display_name: ImmunoDB name: ImmunoDB release: 1 - description: ~ display_name: Celera gene name: Celera_Gene release: 1 - description: ~ display_name: Celera peptide name: Celera_Pep release: 1 - description: ~ display_name: Celera transcript name: Celera_Trans release: 1 - description: ~ display_name: European Nucleotide Archive name: EMBL release: 1 - description: ~ display_name: Predicted European Nucleotide Archive name: EMBL_predicted release: 1 - description: ~ display_name: FlyBase gene name: flybase_gene_id release: 1 - description: ~ display_name: FlyBase translation name: flybase_translation_id release: 1 - description: ~ display_name: FlyBase symbol name: flybase_symbol release: 1 - description: ~ display_name: FlyBase transcript name: flybase_transcript_id release: 1 - description: ~ display_name: Gadfly translation CGID name: gadfly_translation_cgid release: 1 - description: ~ display_name: FlyBase gene name name: FlyBaseName_gene release: 1 - description: ~ display_name: FlyBase translation name name: FlyBaseName_translation release: 1 - description: ~ display_name: FlyBase transcript name name: FlyBaseName_transcript release: 1 - description: ~ display_name: FlyBase gene CGID name: FlyBaseCGID_gene release: 1 - description: ~ display_name: FlyBase transcript CGID name: FlyBaseCGID_transcript release: 1 - description: ~ display_name: FlyBase translation CGID name: FlyBaseCGID_translation release: 1 - description: ~ display_name: BioGRID Interaction data, The General Repository for Interaction Datasets name: BioGRID release: 1 - description: ~ display_name: GenomeRNAi, a database for cell-based RNAi phenotypes name: GenomeRNAi release: 1 - description: ~ display_name: The Interactive Fly name: InteractiveFly release: 1 - description: ~ display_name: Nuclear genes encoding proteins targeted to the mitochondrion name: MitoDrome release: 1 - description: ~ display_name: FlyReactome, a Curated Knowledgebase of Drosophila Melanogaster Pathways name: FlyReactome release: 1 - description: ~ display_name: GO name: GO release: 159 - description: ~ display_name: GO Reference Collection name: GO_REF release: 1 - description: ~ display_name: HGNC Symbol name: HGNC release: 1 - description: ~ display_name: InterPro name: Interpro release: ~ - description: ~ display_name: NCBI gene (formerly Entrezgene) name: EntrezGene release: 1 - description: ~ display_name: MGI Symbol name: MGI release: 1 - description: ~ display_name: MIM gene name: MIM_GENE release: 1 - description: ~ display_name: MIM morbid name: MIM_MORBID release: 1 - description: ~ display_name: PDB name: PDB release: 1 - description: ~ display_name: INSDC protein ID name: protein_id release: 1 - description: ~ display_name: Predicted INSDC Protein ID name: protein_id_predicted release: 1 - description: ~ display_name: RefSeq DNA name: RefSeq_dna release: 1 - description: ~ display_name: RefSeq mRNA name: RefSeq_mRNA release: NCBI Reference Sequence (RefSeq) Database Release 228, January 3, 2025 - description: ~ display_name: RefSeq ncRNA name: RefSeq_ncRNA release: NCBI Reference Sequence (RefSeq) Database Release 228, January 3, 2025 - description: ~ display_name: RefSeq DNA predicted name: RefSeq_dna_predicted release: 1 - description: ~ display_name: RefSeq mRNA predicted name: RefSeq_mRNA_predicted release: NCBI Reference Sequence (RefSeq) Database Release 228, January 3, 2025 - description: ~ display_name: RefSeq ncRNA predicted name: RefSeq_ncRNA_predicted release: NCBI Reference Sequence (RefSeq) Database Release 228, January 3, 2025 - description: ~ display_name: RefSeq peptide name: RefSeq_peptide release: NCBI Reference Sequence (RefSeq) Database Release 228, January 3, 2025 - description: ~ display_name: RefSeq peptide predicted name: RefSeq_peptide_predicted release: NCBI Reference Sequence (RefSeq) Database Release 228, January 3, 2025 - description: ~ display_name: RefSeq RNA name: RefSeq_rna release: 1 - description: ~ display_name: RefSeq RNA predicted name: RefSeq_rna_predicted release: 1 - description: This external_db_id can be used in the seq_region_synonym table. For species such as human, cow, dog we store chromosome names (1-22, X,Y) in the name column of the seq_region table. The RefSeq_genomic is stored as a synonym. eg. NC_000011.10, NT_187365.1 display_name: RefSeq Genomic name: RefSeq_genomic release: 1 - description: ~ display_name: UniProtKB/TrEMBL name: Uniprot/SPTREMBL release: UniProtKB/TrEMBL Release 2025_01 of 05-Feb-2025 - description: ~ display_name: UniProtKB/Swiss-Prot name: Uniprot/SWISSPROT release: UniProtKB/Swiss-Prot Release 2025_01 of 05-Feb-2025 - description: ~ display_name: UniProtKB/SpliceVariant name: Uniprot/Varsplic release: 1 - description: ~ display_name: UniProtKB generic accession number (TrEMBL or SwissProt not differentiated) name: UniProtKB_all release: 1 - description: ~ display_name: Vega gene name: Vega_gene release: 1 - description: ~ display_name: Vega transcript name: Vega_transcript release: 1 - description: ~ display_name: Vega translation name: Vega_translation release: 1 - description: ~ display_name: WormBase Gene name: wormbase_gene release: 1 - description: ~ display_name: WormBase Transcript name: wormbase_transcript release: 1 - description: ~ display_name: Wormpep ID name: wormpep_id release: 1 - description: ~ display_name: WormBase Locus name: wormbase_locus release: 1 - description: ~ display_name: ZFIN name: ZFIN_ID release: 1 - description: ~ display_name: ZFIN expression patterns name: ZFIN_xpat release: 1 - description: ~ display_name: GeneDB name: GeneDB release: 1 - description: ~ display_name: JGI Gene ID (JGI 1.0) name: cint_jgi_v1 release: 1 - description: ~ display_name: JGI Gene ID (JGI 2.0) name: cint_jgi_v2 release: 1 - description: ~ display_name: ANISEED (JGI 1.0) name: cint_aniseed_v1 release: 1 - description: ~ display_name: ANISEED (JGI 2.0) name: cint_aniseed_v2 release: 1 - description: ~ display_name: Ensembl Human Gene name: Ens_Hs_gene release: 1 - description: ~ display_name: Ensembl Human Transcript name: Ens_Hs_transcript release: 1 - description: ~ display_name: Ensembl Human Translation name: Ens_Hs_translation release: 1 - description: ~ display_name: RGD Symbol name: RGD release: 1 - description: ~ display_name: Genoscope pred gene name: Genoscope_pred_gene release: 1 - description: ~ display_name: Genoscope pred transcript name: Genoscope_pred_transcript release: 1 - description: ~ display_name: Genoscope annotated gene name: Genoscope_annotated_gene release: 1 - description: ~ display_name: Genoscope pred translation name: Genoscope_pred_translation release: 1 - description: ~ display_name: Genoscope annotated transcript name: Genoscope_ann_transcript release: 1 - description: ~ display_name: Genoscope annotated translation name: Genoscope_ann_translation release: 1 - description: ~ display_name: miRBase name: miRBase release: 1 - description: ~ display_name: SGD name: SGD release: 1 - description: ~ display_name: IPI name: IPI release: 1 - description: ~ display_name: CCDS name: CCDS release: 1 - description: ~ display_name: Sequence Publications name: PUBMED release: 1 - description: ~ display_name: UniGene name: UniGene release: "25 Apr 2013 \\t, UniGene Build #236 Homo sapiens" - description: ~ display_name: RFAM name: RFAM release: 1 - description: ~ display_name: Xenbase name: Xenbase release: 1 - description: ~ display_name: Havana gene name: OTTG release: 1 - description: ~ display_name: Havana transcript name: OTTT release: 1 - description: ~ display_name: Havana translation name: OTTP release: 1 - description: ~ display_name: Havana transcript having same CDS name: shares_CDS_with_OTTT release: 1 - description: ~ display_name: Transcript having exact match between ENSEMBL and HAVANA name: shares_CDS_and_UTR_with_OTTT release: 1 - description: ~ display_name: Ensembl gene name: ENSG release: 1 - description: ~ display_name: Medaka Genome Project name: Medaka release: 1 - description: ~ display_name: Ensembl transcript having exact match with Havana name: ENST_ident release: 1 - description: ~ display_name: Ensembl transcript sharing CDS with Havana name: ENST_CDS release: 1 - description: ~ display_name: Ensembl Mouse Transcript name: Ens_Mm_transcript release: 1 - description: ~ display_name: Ensembl Mouse Translation name: Ens_Mm_translation release: 1 - description: ~ display_name: IMGT/HLA name: IMGT_HLA release: 1 - description: Updated from alt_gene to misc due to user query display_name: Oxford Ponting Group Monodelphis predictions transcript id name: Oxford_FGU_Md_tscript release: 1 - description: Updated from alt_gene to misc due to user query display_name: Oxford Ponting Group Platypus predictions gene id name: Oxford_FGU_Oa_gene release: 1 - description: ~ display_name: Oxford Ponting Group Platypus predictions transcript id name: Oxford_FGU_Oa_tscript release: 1 - description: ~ display_name: Ensembl Dog Translation name: Ens_Cf_translation release: 1 - description: ~ display_name: Ensembl Zebrafish Transcript name: Ens_Dr_transcript release: 1 - description: ~ display_name: Ensembl Zebrafish Translation name: Ens_Dr_translation release: 1 - description: ~ display_name: Ensembl Chicken Gene name: Ens_Gg_gene release: 1 - description: ~ display_name: Ensembl Chicken Transcript name: Ens_Gg_transcript release: 1 - description: ~ display_name: Ensembl Chicken Translation name: Ens_Gg_translation release: 1 - description: ~ display_name: IMCB Fugu Gene name: IMCB_Tr_gene release: 1 - description: ~ display_name: Ensembl Fugu Transcript name: Ens_Tr_transcript release: 1 - description: ~ display_name: Ensembl Stickleback Translation name: Ens_Ga_translation release: 1 - description: ~ display_name: Ixodes ManualAnnotation name: Ixodes_ManualAnnotation release: 1 - description: ~ display_name: BRC4 Community Annotation name: BRC4_Community_Annotation release: 1 - description: ~ display_name: IMGT/LIGM-DB name: IMGT/LIGM_DB release: 1 - description: ~ display_name: IMGT/GENE-DB name: IMGT/GENE_DB release: 1 - description: ~ display_name: Ensembl Turkey Transcript name: Ens_Mg_transcript release: 1 - description: ~ display_name: Ensembl Zebrafinch Transcript name: Ens_Tg_transcript release: 1 - description: ~ display_name: Ensembl Cat Translation name: Ens_Fc_translation release: 1 - description: ~ display_name: Platypus olfactory receptor gene name: Platypus_olfactory_receptor release: 1 - description: ~ display_name: PRF name: PRF release: 1 - description: ~ display_name: PIR name: PIR release: 1 - description: ~ display_name: Genoscope tetraodon cDNA name: TetNig_cdna release: 1 - description: ~ display_name: Stickleback cDNA name: GasAcu_cdna release: 1 - description: ~ display_name: Platypus 454 cDNA name: OrnAna_454_cdna release: 1 - description: ~ display_name: Takifugu cDNA name: TakRub_cdna release: 1 - description: ~ display_name: Ciona intestinalis EST name: CioInt_est release: 1 - description: ~ display_name: Ciona intestinalis cDNA name: CioInt_cdna release: 1 - description: ~ display_name: Takifugu EST name: TakRub_est release: 1 - description: ~ display_name: Genoscope mouse exofish econtig name: TetNig_mouse_econtig release: 1 - description: ~ display_name: Genoscope fugu exofish econtig name: TetNig_fugu_econtig release: 1 - description: ~ display_name: Genoscope human exofish econtig name: TetNig_human_econtig release: 1 - description: ~ display_name: Genoscope rat exofish econtig name: TetNig_rat_econtig release: 1 - description: ~ display_name: Genoscope chicken exofish econtig name: TetNig_chick_econtig release: 1 - description: ~ display_name: Medaka EST name: OryLat_est release: 1 - description: ~ display_name: Trace Archive id name: Trace_archive release: 1 - description: ~ display_name: Ciona savignyi EST name: CioSav_est release: 1 - description: ~ display_name: Generic exdb for WormBase id of any type for feature table name: wormbase_id release: 1 - description: ~ display_name: Eukaryotic Promoter Database (Bucher) name: EPD release: 1 - description: ~ display_name: MEROPS - the Peptidase Database name: MEROPS release: 1 - description: ~ display_name: TransFac, database of transcription factors and their binding sites name: TransFac release: 1 - description: ~ display_name: UCSC Stable ID name: UCSC release: 1 - description: ~ display_name: Clone-based (Vega) gene name: Clone_based_vega_gene release: 1 - description: ~ display_name: Clone-based (Ensembl) gene name: Clone_based_ensembl_gene release: 1 - description: ~ display_name: Clone-based (Vega) transcript name: Clone_based_vega_transcript release: 1 - description: ~ display_name: Clone-based (Ensembl) transcript name: Clone_based_ensembl_transcript release: 1 - description: ~ display_name: DataBase of Aberrant 3' Splice Sites name: DBASS3 release: 1 - description: ~ display_name: DataBase of Aberrant 5' Splice Sites name: DBASS5 release: 1 - description: ~ display_name: Human Protein Atlas name: HPA release: 1 - description: ~ display_name: WikiGene name: WikiGene release: 1 - description: ~ display_name: Tgut symbol - Prof. David Burt, Roslin Institute and Royal (Dick) School of Veterinary Studies, Edinburgh University, UK name: Tgut_symbol release: 1 - description: ~ display_name: Duck consortium name: Duck_consortium release: 1 - description: ~ display_name: Beijing Genomics Institute (BGI) duck transcriptome name: BGI_duck_transcriptome release: 1 - description: ~ display_name: GOSlim GOA name: goslim_goa release: 1 - description: ~ display_name: Wellcome Trust Sanger Institute (WTSI) gorilla transcriptome name: WTSI_gorilla_transcriptome release: 1 - description: ~ display_name: UniParc name: UniParc release: 1 - description: ~ display_name: BRENDA name: BRENDA release: 1 - description: ~ display_name: BioCyc name: BioCyc release: 1 - description: ~ display_name: EchoBASE name: EchoBASE release: 1 - description: ~ display_name: EcoGene name: EcoGene release: 1 - description: ~ display_name: SubtiList name: SubtiList release: 1 - description: ~ display_name: TubercuList name: TubercuList release: 1 - description: ~ display_name: Expression Atlas name: ArrayExpress release: 1 - description: ~ display_name: DIP name: DIP release: 1 - description: ~ display_name: DisProt name: DisProt release: 1 - description: ~ display_name: DrugBank name: DrugBank release: 1 - description: ~ display_name: HAMAP name: HAMAP release: 1 - description: ~ display_name: HSSP name: HSSP release: 1 - description: ~ display_name: IntAct name: IntAct release: 1 - description: ~ display_name: KEGG name: KEGG release: 1 - description: ~ display_name: PDBsum name: PDBsum release: 1 - description: ~ display_name: PeroxiBase name: PeroxiBase release: 1 - description: ~ display_name: REBASE name: REBASE release: 1 - description: ~ display_name: Reactome name: Reactome release: 51 - description: ~ display_name: RegulonDb name: RegulonDb_Transcript release: 1 - description: ~ display_name: EnzymeCommission name: IntEnz release: 1 - description: ~ display_name: European Nucleotide Archive name: EMBLBANK_GENE release: 1 - description: ~ display_name: JGI ID (JGI 2.0) name: phatr_jgi_v2 release: 1 - description: ~ display_name: JGI Gene ID (JGI 2.0 unmapped sequence) name: phatr_jgi_v2_bd_gene release: 1 - description: ~ display_name: JGI Gene ID (JGI 2.0) name: phatr_jgi_v2_gene release: 1 - description: ~ display_name: JGI ID (JGI 2.0 unmapped sequence) name: thaps_jgi_v2_bd release: 1 - description: ~ display_name: JGI ID (JGI 2.0) name: thaps_jgi_v2 release: 1 - description: ~ display_name: CADRE name: CADRE_Afum_A1163 release: 1 - description: ~ display_name: RNAmmer name: RNAMMER release: 1 - description: ~ display_name: tRNAScan-SE name: TRNASCAN_SE release: 1 - description: ~ display_name: DictyBase name: dictyBase release: 1 - description: ~ display_name: AspGD name: ASPGD release: 1 - description: ~ display_name: AspGD name: ASPGD_GENE release: 1 - description: ~ display_name: AspGD name: ASPGD_TRANSCRIPT release: 1 - description: ~ display_name: CADRE name: CADRE release: 1 - description: ~ display_name: CADRE name: CADRE_GENE release: 1 - description: ~ display_name: CADRE name: CADRE_TRANSCRIPT release: 1 - description: ~ display_name: SGD gene name name: SGD_GENE release: 1 - description: ~ display_name: SGD transcript name name: SGD_TRANSCRIPT release: 1 - description: ~ display_name: JGI ID (JGI 1.1) name: phyra_jgi_v1.1 release: '1.1' - description: ~ display_name: JGI ID (JGI 1.1) name: physo1_jgi_v1.1 release: '1.1' - description: ~ display_name: Broad Institute name: BROAD_P_infestans release: 1 - description: ~ display_name: JGI Gene ID (JGI Triad 1.0) name: triad_jgi_v1.0_gene release: 1 - description: ~ display_name: JGI Transcript ID (JGI Triad 1.0) name: triad_jgi_v1.0_transcript release: 1 - description: ~ display_name: JGI ID (JGI Triad 1.0) name: triad_jgi_v1.0 release: 1 - description: ~ display_name: SchistoDB name: SCHISTODB release: 1 - description: ~ display_name: Broad Institute name: BROAD_F_oxysporum release: 1 - description: ~ display_name: Broad Institute name: BROAD_F_oxysporum_GENE release: 1 - description: ~ display_name: Broad Institute name: BROAD_F_oxysporum_TRANSCRIPT release: 1 - description: ~ display_name: Broad Institute name: BROAD_G_zeae release: 1 - description: ~ display_name: Broad Institute name: BROAD_G_moniliformis release: 1 - description: ~ display_name: Broad Institute name: BROAD_G_moniliformis_GENE release: 1 - description: ~ display_name: Broad Institute name: BROAD_G_moniliformis_TRANSCRIPT release: 1 - description: ~ display_name: Pythium genome database name: PGD_GENE release: 1 - description: ~ display_name: Broad Institute name: BROAD_U_maydis release: 1 - description: ~ display_name: Broad Institute name: BROAD_U_maydis_GENE release: 1 - description: ~ display_name: Broad Institute name: BROAD_U_maydis_TRANSCRIPT release: 1 - description: ~ display_name: Broad Institute name: BROAD_P_triticina release: 1 - description: ~ display_name: Broad Institute name: BROAD_P_triticina_GENE release: 1 - description: ~ display_name: Broad Institute name: BROAD_P_triticina_TRANSCRIPT release: 1 - description: ~ display_name: SpBase name: SpBase release: 1 - description: ~ display_name: Nectria JGI gene name: necha_jgi_v2.0_gene release: 2 - description: ~ display_name: Nectria JGI transcript name: necha_jgi_v2.0_transcript release: 2 - description: ~ display_name: Nectria JGI name: necha_jgi_v2.0 release: 2 - description: ~ display_name: Tuber Genome Browser name: tuber_genoscope_gene release: 1 - description: ~ display_name: Mycosphaerella JGI gene name: Mycgr3_jgi_v2.0_gene release: 2 - description: ~ display_name: Broad Institute name: BROAD_P_NODORUM_GENE release: 1 - description: ~ display_name: PomBase name: PomBase_TRANSCRIPT release: 1 - description: ~ display_name: PomBase (peptide) name: PomBase_TRANSLATION release: 1 - description: ~ display_name: CBS Server name: CBS release: 1 - description: ~ display_name: Cluster of Orthologous Groups (NCBI) name: COG release: 1 - description: ~ display_name: Candida Genome Database name: CGD release: 1 - description: ~ display_name: ProSite ID name: ProSite release: 1 - description: ~ display_name: SMART ID name: SMART release: 1 - description: ~ display_name: SPD ID name: SPD release: 1 - description: ~ display_name: PomBase Ontology ID name: PBO release: 1 - description: ~ display_name: Fission Yeast Phenotype Ontology name: FYPO release: 1 - description: ~ display_name: PSI-MOD, Post Translational Modification Ontology name: MOD release: 1 - description: ~ display_name: Ashbya Genome Database name: AGD_GENE release: 1 - description: ~ display_name: Ashbya Genome Database name: AGD_TRANSCRIPT release: 1 - description: ~ display_name: EST Cluster (BGI Indica) name: BGI_EST_Cluster release: 1 - description: ~ display_name: Enzyme EC Number name: EC_NUMBER release: 1 - description: ~ display_name: Flanking Sequence Tag (FST) name: FSTs release: 1 - description: ~ display_name: Gramene name: Gramene_MarkersDB release: 1 - description: ~ display_name: GenBank mRNA (Gramene) name: Gramene_MarkersDB_mRNA release: 1 - description: ~ display_name: GenBank EST (Gramene) name: Gramene_MarkersDB_EST release: 1 - description: ~ display_name: NASC Gene ID name: NASC_GENE_ID release: 1 - description: ~ display_name: PlantGDB Transcript name: PlantGDB_PUT release: 1 - description: ~ display_name: IRGSP/RAP Gene name: RAP_Gene release: 1 - description: ~ display_name: MSU/TIGR Locus name: TIGR_LOCUS release: 1 - description: ~ display_name: TAIR name: TAIR_LOCUS release: 1 - description: ~ display_name: TAIR Locus (Model) name: TAIR_LOCUS_MODEL release: 1 - description: ~ display_name: Gene Index name: TIGR_GeneIndex release: 1 - description: ~ display_name: Plant Trait Ontology name: TO release: 1 - description: ~ display_name: Plant Structure Ontology name: PO release: 1 - description: ~ display_name: Gene Ontology name: GO_to_gene release: 1 - description: ~ display_name: Plant Growth Stage name: GRO release: 1 - description: ~ display_name: Locus Reference Genomic name: LRG release: 1 - description: ~ display_name: LRG display in Ensembl gene name: ENS_LRG_gene release: 1 - description: ~ display_name: LRG display in Ensembl transcript name: ENS_LRG_transcript release: 1 - description: transcript name from miRBase display_name: miRBase transcript name name: miRBase_trans_name release: 1 - description: transcript name from RFAM display_name: RFAM transcript name name: RFAM_trans_name release: 1 - description: transcript name from HGNC display_name: Transcript name name: HGNC_trans_name release: 1 - description: transcript name from MGI display_name: MGI transcript name name: MGI_trans_name release: 1 - description: transcript name from ZFIN display_name: ZFIN transcript name name: ZFIN_ID_trans_name release: 1 - description: ~ display_name: Illumina Bodymap transcriptome name: Illumina_Bodymap_transcriptome release: 1 - description: ~ display_name: UniProtKB Gene Name name: Uniprot_gn release: 1 - description: Gibbon Genome Sequencing Consortium display_name: Gibbon Genome Sequencing Consortium name: GGSC release: 1 - description: ~ display_name: Broad Institute of MIT and Harvard name: Broad Institute release: 1 - description: Pfam from Vega display_name: PFAM name: PFAM release: 1 - description: ~ display_name: Swine Genome Sequencing Consortium name: SGSC release: 1 - description: ~ display_name: Riken Institute name: RIKEN release: 1 - description: Tasmanian Devil Genome Sequencing Consortium display_name: Tasmanian Devil Sequencing Consortium name: SHSC release: 1 - description: Pfam release 22, from Vega display_name: PFAM name: PFAM release: 22 - description: Pfam release 23, from Vega display_name: PFAM name: PFAM release: 23 - description: Pfam release 24, from Vega display_name: PFAM name: PFAM release: 24 - description: Pfam release 25, from Vega display_name: PFAM name: PFAM release: 25 - description: Pfam release 26, from Vega display_name: PFAM name: PFAM release: 26 - description: Primary assembly of this species genome from the GRC display_name: GRC primary assembly name: GRC_primary_assembly release: 1 - description: ~ display_name: Ensembl Stickleback Gene name: Ens_Ga_gene release: 1 - description: ~ display_name: Ensembl Stickleback Transcript name: Ens_Ga_transcript release: 1 - description: ~ display_name: Chimpanzee Sequencing and Analysis Consortium name: CSAC release: 1 - description: ~ display_name: PomBase Interaction Genetic name: PomBase_Interaction_GENETIC release: 1 - description: ~ display_name: PomBase Interaction Physical name: PomBase_Interaction_PHYSICAL release: 1 - description: ~ display_name: PomBase Gene Name name: PomBase_Gene_Name release: 1 - description: ~ display_name: PomBase Systematic ID name: PomBase_Systematic_ID release: 1 - description: ~ display_name: Orthologous Gene name: PomBase_Ortholog release: 1 - description: ~ display_name: Ensembl Pig Translation name: Ens_Ss_translation release: 1 - description: ~ display_name: Pelodiscus sinensis sequencing consortium name: Psinensis_sequencing_consortium release: 1 - description: Broad Institute Magnaporthe comparative Database display_name: Magnaporthe comparative DB name: BROAD_Magnaporthe_DB release: 1 - description: Broad Institute Magnaporthe comparative Database display_name: Magnaporthe comparative DB name: BROAD_Magnaporthe_DB_GENE release: 1 - description: Broad Institute Magnaporthe comparative Database display_name: Magnaporthe comparative DB name: BROAD_Magnaporthe_DB_TRANSCRIPT release: 1 - description: ~ display_name: Beijing Genomics Institute, Shenzhen name: BGI Shenzhen release: 1 - description: ~ display_name: International Cat Genome Sequencing Consortium name: ICGSC release: 1 - description: ~ display_name: The Genome Institute, Washington University School of Medicine name: WashingtonUniversity release: 1 - description: cDNA from the Berkeley Drosophila Genome Project display_name: Fly cDNA name: BDGP_cDNA release: 1 - description: Gold Collection cDNA from the Berkeley Drosophila Genome Project display_name: Fly gold cDNA name: BDGP_cDNA_Gold_Collection release: 1 - description: ~ display_name: Ensembl Zebrafinch Translation name: Ens_Tg_translation release: 1 - description: Toxoplasma Genomic Resource Database. display_name: ToxoDB name: ToxoDB release: 1 - description: Sequence Ontology display_name: Sequence Ontology name: SO release: 1 - description: The Brassica Genome Database display_name: BrassEnsembl name: BRAD_GENE release: 1 - description: The Brassica Genome Database display_name: BrassEnsembl name: BRAD_TRANSCRIPT release: 1 - description: Resource to show GOA records for Uniprot Accessions display_name: GOA name: Quick_Go release: 1 - description: Resource to show GOA view of original annotation sources display_name: Quick Go name: Quick_Go_Evidence release: 1 - description: ~ display_name: IGDBCAS v1.4 Gene name: IGDBCAS-v1.4_GENE release: '1.4' - description: ~ display_name: IGDBCAS v1.4 Transcript name: IGDBCAS-v1.4_TRANSCRIPT release: '1.4' - description: gene ID/NAME in the JGI gff3 file display_name: JGI Gene name: JGI_GENE release: 1 - description: transcript/mRNA ID/NAME in the JGI gff3 file display_name: JGI Transcript name: JGI_TRANSCRIPT release: 1 - description: ~ display_name: IRGSP v1 Gene name: IRGSPv1_GENE release: 1 - description: ~ display_name: IRGSP v1 Transcript name: IRGSPv1_TRANSCRIPT release: 1 - description: ~ display_name: Ensembl Coelacanth Gene name: Ens_Lc_gene release: 1 - description: Rat Genome Sequencing Consortium display_name: Rat Genome Sequencing Consortium name: RGSC release: 1 - description: ~ display_name: BROAD Institute coelacanth transcriptome name: BROAD_coelacanth_transcriptome release: 1 - description: ~ display_name: Ensembl Anole Lizard Translation name: Ens_Ac_translation release: 1 - description: BGI gene identifier display_name: BGI Gene name: BGI_Gene release: 1 - description: ~ display_name: GeneIndex name: GeneIndex release: 1 - description: "Plant environmental conditions ontology terms. More information: http://www.gramene.org/plant_ontology/ontology_browse.html#eo" display_name: Environment Ontology name: EO release: 1 - description: ~ display_name: Uppsala University name: Uppsala University release: 1 - description: GenBank identifier display_name: GenBank name: GenBank release: 1 - description: This is read out of the *.gff files provided to us by the NCBI when we do a RefSeq import or a CCDS comparison. It has the key "gene_id" and is found at the start of the 9th field. display_name: RefSeq gene name name: RefSeq_gene_name release: 1 - description: ~ display_name: Sol Genomics Network name: SGN release: 1 - description: Imported alignments from the Genome Reference Consortium. display_name: GRC alignment import name: GRC_alignment_import release: 1 - description: ~ display_name: Broad Institute transcriptome data for monodelphis name: BROAD_monodelphis_transcriptome release: 1 - description: ~ display_name: Swiss Institute of Bioinformatics transcriptome data for monodelphis name: SIB_mondelphis_transcriptome release: 1 - description: ~ display_name: Swiss Institute of Bioinformatics transcriptome data for platypus name: SIB_platypus_transcriptome release: 1 - description: ~ display_name: Swiss Institute of Bioinformatics transcriptome data for orangutan name: SIB_orangutan_transcriptome release: 1 - description: Organism listed in NCBI display_name: NCBI species name: NCBI_TAXONOMY release: 1 - description: Parasite-host interaction identifiers from PHI-base display_name: PHI-base accession name: PHI release: 1 - description: VectorBase xref. display_name: AnoXcel name: AnoXcel release: 2 - description: Potato Genome Sequencing Consortium database display_name: PGSC name: PGSC_GENE release: 1 - description: transcript name projected from UniProt gene name display_name: UniProt transcript name name: Uniprot_gn_trans_name release: 1 - description: Global Musa Genomics Consortium gene cross-references display_name: GMGC name: GMGC_GENE release: 1 - description: The Texas A&M College of Veterinary Medicine & Biomedical Sciences, Department of Veterinary Integrative Biosciences. display_name: TAMU VIBS name: tamu_vibs release: 1 - description: This external_db_id was initially made for use in the seq_region_synonym table. For species such as human, cow, dog we store chromosome names (1-22, X,Y) in the name column of the seq_region table. The INSDC accession is stored as a synonym. display_name: International Nucleotide Sequence Database Collaboration name: INSDC release: 0 - description: International Sheep Genome Consortium display_name: International Sheep Genome Consortium name: ISGC release: 1 - description: TAIR gene names display_name: TAIR Gene Name name: TAIR_SYMBOL release: 10 - description: cross-references to TIGR internal identifiers, attached to genes. display_name: TIGR Internal ID name: TIGR_ID release: 1 - description: GOA xrefs (to UniProt identifiers) display_name: UniProtKB-Gene Ontology Annotation name: GOA release: 1 - description: Cross-references to the source gene model when importing from ENA. display_name: European Nucleotide Archive name: ENA_GENE release: 1 - description: Cross-references to the source transcript model when importing from ENA. display_name: European Nucleotide Archive name: ENA_TRANSCRIPT release: 1 - description: ~ display_name: LGBPratt_EST_Cluster name: LGBPratt_EST_Cluster release: 1 - description: ~ display_name: Baylor College of Medicine, Texas Medical Center name: BaylorCollege release: 1 - description: Cross-references to Rhea attached to translation objects display_name: Rhea name: Rhea release: 1 - description: ~ display_name: Ensembl Cow Translation name: Ens_Bt_translation release: 1 - description: Cross-reference to the ENA object from which the gene has been inferred, when loading a genome from ENA records. display_name: European Nucleotide Archive feature (gene source) name: ENA_FEATURE_GENE release: 1 - description: Cross-reference to the ENA object from which the transcript has been inferred, when loading a genome from ENA records. display_name: European Nucleotide Archive feature (transcript source) name: ENA_FEATURE_TRANSCRIPT release: 1 - description: Cross-reference to the ENA object from which the translation has been inferred, when loading a genome from ENA records. display_name: European Nucleotide Archive feature (translation source) name: ENA_FEATURE_PROTEIN release: 1 - description: ~ display_name: Anolis Genome Project name: AGP release: 1 - description: Turkey Genome Consortium display_name: Turkey Genome Consortium name: Turkey Genome Consortium release: 1 - description: Yutaka Satou Kyoto University display_name: Yutaka Satou Kyoto University name: Yutaka_Satou_Kyoto_University release: 1 - description: ~ display_name: International Chicken Genome Consortium name: Chicken_Genome_Consortium release: 1 - description: TAIR identifier to link to Ensembl Translation entities. The main requirement behind this entry, is to be able to link TAIR GO annotations to Ensembl Translation objects. display_name: TAIR Translation identifier name: TAIR_TRANSLATION release: 1 - description: annotation provided by Arizona Genome Institute display_name: AGI Gene name: AGI_GENE release: 1 - description: annotation provided by Arizona Genome Institute display_name: AGI Transcript name: AGI_TRANSCRIPT release: 1 - description: ~ display_name: CGNC Symbol name: CGNC release: 1 - description: MetaCyc database of metabolic pathways display_name: MetaCyc name: MetaCyc release: 1 - description: PHI-base phenotype ontology for genes proven to affect the outcome of pathogen-host interactions display_name: PHI-base phenotype ontology name: PHIP release: 1 - description: PHI-base experimental evidence ontology for genes proven to affect the outcome of pathogen-host interactions display_name: PHI-base condition ontology name: PHIE release: 1 - description: PMC identifier for use with PubMedCentral (http://www.ncbi.nlm.nih.gov/pmc and http://europepmc.org/) display_name: PubMedCentral name: PubMedCentral release: 1 - description: Pfam release 27, from Vega display_name: PFAM name: PFAM release: 27 - description: transcript name projected from EntrezGene gene name display_name: EntrezGene transcript name name: EntrezGene_trans_name release: 1 - description: Broad Institute Microbotryum violaceum Database display_name: Broad Institute name: BROAD_M_violaceum release: 1 - description: Broad Institute Microbotryum violaceum Database display_name: Broad Institute name: BROAD_M_violaceum_GENE release: 1 - description: Broad Institute Microbotryum violaceum Database display_name: Broad Institute name: BROAD_M_violaceum_TRANSCRIPT release: 1 - description: Ensembl Plants identifiers serving GO projections from a reference species to other plants species. display_name: Ensembl Plants name: Ensembl_Plants release: 1 - description: ChEMBL external references imported via Uniprot mappings display_name: ChEMBL name: ChEMBL release: 1 - description: International Barley Sequencing Consortium gene identifier display_name: IBSC Gene ID name: IBSC release: 1 - description: ~ display_name: PRIDE name: PRIDE release: 1 - description: Database dedicated to the analysis of the genomes of Legionella display_name: LegioList name: LegioList release: ~ - description: BindingDB is a public, web-accessible database of measured binding affinities display_name: BindingDB name: BindingDB release: 1 - description: STRING - Known and Predicted Protein-Protein Interactions display_name: STRING name: STRING release: 1 - description: UniPathway is a manually curated resource of enzyme-catalyzed and spontaneous chemical reactions. display_name: UniPathway name: UniPathway release: ~ - description: The SWISS-MODEL Repository is a database of annotated three-dimensional comparative protein structure models generated by the fully automated homology-modelling pipeline SWISS-MODEL. display_name: SWISS-MODEL name: SWISS_MODEL release: 1 - description: The MIPS Comprehensive Yeast Genome Database (CYGD) aims to present information on the molecular structure and functional network of the entirely sequenced, well-studied model eukaryote, the budding yeast Saccharomyces cerevisiae. display_name: CYGD name: CYGD release: 1 - description: The Pseudomonas Genome database has been a resource for peer-reviewed, continually-updated annotations for the Pseudomonas aeruginosa PAO1 reference strain's genome and, more recently, comparative analyses of several related Pseudomonas species. display_name: Pseudomonas Genome Database name: PseudoCAP release: 1 - description: MINT, the Molecular INTeraction database, focuses on experimentally verified protein-protein interactions mined from the scientific literature by expert curators. display_name: MINT name: MINT release: 1 - description: ~ display_name: Ant Genomes Portal name: Ant Genomes Portal release: 1 - description: ~ display_name: Ensembl Turkey Translation name: Ens_Mg_translation release: 1 - description: "The National Laboratory of Scientific Computation (Laboratorio Nacional de Computacao Cientifica: LNCC), Brazil" display_name: LNCC name: LNCC release: 1 - description: transcript name from RGD display_name: RGD transcript name name: RGD_trans_name release: 1 - description: transcript name from Xenbase display_name: Xenbase transcript name name: Xenbase_trans_name release: 1 - description: ~ display_name: NasoniaBase name: NasoniaBase release: 1 - description: ~ display_name: WormBase Gene Sequence-name name: wormbase_gseqname release: 1 - description: ~ display_name: Sanger Wellcome Trust Institute name: Sanger release: 1 - description: ~ display_name: Ensembl translation having exact match with Havana name: ENSP_ident release: 1 - description: Ensembl Metazoa identifiers serving GO projections from a reference species to other metazoa species. display_name: Ensembl Metazoa name: Ensembl_Metazoa release: 1 - description: ~ display_name: Ensembl Macaque Translation name: Ens_Mmu_translation release: 1 - description: Specific accession used by PomBase for ontology annoation extensions display_name: PomBase GO AnnotationExtensions name: PomBase_GO_AnnotationExtensions release: 1 - description: UniProt Subcellular Location (http://www.uniprot.org/manual/subcellular_location) display_name: UniProtKB/SwissProt Subcellular Locatisation name: SP_SL release: 1 - description: Protein Ontology term (previously PR) - http://pir.georgetown.edu/pro/pro.shtml display_name: Protein Ontology name: PR release: 1 - description: PomBase specific publications display_name: PomBase PubMed ID name: PUBMED_POMBASE release: 1 - description: Cell type ontology annotations (http://cellontology.org/) display_name: Cell Type Ontology name: CL release: 1 - description: ChEBI chemical database display_name: ChEBI Chemical Database name: ChEBI release: 1 - description: Annotation extension terms for the Fission Yeast Phenotype Ontology (FYPO) display_name: FYPO Extensions name: FYPO_EXT release: 1 - description: Scientific database for E. coli and a division of MetaCyc (http://ecocyc.org/) display_name: EcoCyc name: EcoCyc release: 1 - description: http://obofoundry.org/wiki/index.php/PATO:Main_Page display_name: Phenotypic Qualities Ontology name: PATO release: 1 - description: UniProtKB Keywords for describing UniProt annotations display_name: UniProtKB Keywords name: UniProtKB-KW release: 1 - description: Used in the annotation of quiescent cell phenotypes. display_name: PomBase Quiescence Ontology name: PBQ release: 1 - description: ~ display_name: University of Texas name: University of Texas release: 1 - description: KEGG pathway and enzyme display_name: KEGG Pathway and Enzyme name: KEGG_Enzyme release: 1 - description: ~ display_name: Glanville Fritillary Butterfly Genome Project name: gfbgp release: 1 - description: ~ display_name: Ensembl internal synonym name: ensembl_internal_synonym release: 1 - description: Digital Object Identifier used to uniquely identify an object such as an electronic document. display_name: Digital Object Identifier name: DOI release: 1 - description: ~ display_name: Zootermopsis nevadensis Genome Project name: zngp release: 1 - description: MIPS Fusarium graminearum Genome Database display_name: FGDB name: FGDB release: 1 - description: Ensembl Fungi identifiers serving GO projections from a reference species to other fungal species. display_name: Ensembl Fungi name: Ensembl_Fungi release: 1 - description: Sequence identity to RNAcentral ids display_name: RNAcentral name: RNAcentral release: 1 - description: ~ display_name: Strigamia maritima Community Annotation name: Smar_Community_Annotation release: ~ - description: Name for gene assigned from Rfam alignment display_name: Rfam Gene Name name: RFAM_GENE release: ~ - description: Bread wheat survey sequence gene models from PGSB Wheat Genome Database (formerly MIPS). Release 2.2 display_name: Wheat survey sequence PGSB gene identifier name: PGSB_WHEAT_GENE release: '2.2' - description: Bread wheat 3B pseudomolecule gene models from INRA GDEC group. display_name: GDEC 3B gene identifier name: GDEC_GENE release: '1.0' - description: Gene identifiers from Araport, the Arabidopsis information portal (formerly TAIR). display_name: Araport name: ARAPORT_GENE release: 1 - description: The Medicago truncatula Genome Database (MTGD), maintained by JCVI. display_name: MTGD name: MTGD release: '4.0' - description: Reactome entries linked to genes display_name: Reactome gene name: Reactome_gene release: ~ - description: Reactome entries linked to transcripts display_name: Reactome transcript name: Reactome_transcript release: ~ - description: Specific accession used by PomBase for source reference display_name: PomBase Reference name: PB_REF release: ~ - description: ~ display_name: Gene Expression Omnibus name: GEO release: ~ - description: Aegilops tauschii GigaDB gene identifier display_name: Aegilops tauschii GigaDB identifier name: GigaDB_A_tauschii release: 1 - description: ~ display_name: RegulonDb name: RegulonDb_Operon release: ~ - description: The Experimental Factor Ontology provides a systematic description of many experimental variables available in EBI databases, and for external projects such as the NHGRI GWAS catalog. It combines parts of several biological ontologies, such as UBERON anatomy, ChEBI chemical compounds, and Cell Ontology. display_name: Experimental Factor Ontology name: EFO release: ~ - description: EpiRR is a registry of reference epigenomes. display_name: EpiRR name: EpiRR release: ~ - description: ~ display_name: VGNC Symbol name: VGNC release: ~ - description: transcript name from VGNC display_name: VGNC transcript name name: VGNC_trans_name release: ~ - description: dbSNP variant corresponding to Vega 1kG LOF Variant. display_name: dbSNP name: dbSNP release: ~ - description: ~ display_name: VectorBase Proteome name: VectorBase_Proteome release: ~ - description: Ensembl Protists identifiers serving GO projections from a reference species to other protist species. display_name: Ensembl Protists name: Ensembl_Protists release: 1 - description: Mouse Genomes Project display_name: Mouse Genomes Project name: MGP release: ~ - description: ~ display_name: Nonhuman Primate Reference Transcriptome Resource name: NHPRTR release: ~ - description: Entrez Gene (www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene) is NCBI's database for gene-specific information. It does not include all known or predicted genes; instead Entrez Gene focuses on the genomes that have been completely sequenced, that have an active research community to contribute gene-specific information, or that are scheduled for intense sequence analysis. The content of Entrez Gene represents the result of curation and automated integration of data from NCBI's Reference Sequence project (RefSeq), from collaborating model organism databases, and from many other databases available from NCBI. Records are assigned unique, stable and tracked integers as identifiers. The content (nomenclature, map location, gene products and their attributes, markers, phenotypes, and links to citations, sequences, variation details, maps, expression, homologs, protein domains and external databases) is updated as new information becomes available. Entrez Gene is a step forward from NCBI's LocusLink, with both a major increase in taxonomic scope and improved access through the many tools associated with NCBI Entrez. display_name: Database of genes from NCBI RefSeq genomes name: GeneID release: ~ - description: NCBI's reference sequence (RefSeq) database (http://www.ncbi.nlm.nih.gov/RefSeq/) is a curated non-redundant collection of sequences representing genomes, transcripts and proteins. The database includes 3774 organisms spanning prokaryotes, eukaryotes and viruses, and has records for 2,879,860 proteins (RefSeq release 19). RefSeq records integrate information from multiple sources, when additional data are available from those sources and therefore represent a current description of the sequence and its features. Annotations include coding regions, conserved domains, tRNAs, sequence tagged sites (STS), variation, references, gene and protein product names, and database cross-references. Sequence is reviewed and features are added using a combined approach of collaboration and other input from the scientific community, prediction, propagation from GenBank and curation by NCBI staff. The format of all RefSeq records is validated, and an increasing number of tests are being applied to evaluate the quality of sequence and annotation, especially in the context of complete genomic sequence. display_name: NCBI Reference Sequences name: RefSeq release: ~ - description: Historical gene identifier linking to the Ensembl Plants Archive site. display_name: Ensembl Plants Archive name: Archive_Plants release: 1 - description: Maping from translation to XREF display_name: Ensembl Plants name: Ensembl_Plants release: ~ - description: MaizeGDB is a community-oriented, long-term, federally funded informatics service to researchers focused on the crop plant and model organism Zea mays. display_name: MaizeGDB name: MaizeGDB release: ~ - description: ~ display_name: Botrytis community symbol name: Botrytis_community_symbol release: ~ - description: "The <A HREF=\"http://barlex.barleysequence.org/\">barley genome explorer</A> allows a visual inspection of BAC overlaps. In addition to a graph view the user can access dotplots and fingerprints to compare two individual BACs with each other. Information to genes and markers is available as well. " display_name: "BARLEX: The Barley Genome Explorer " name: BARLEX release: ~ - description: "The complete swine olfactory subgenome: expansion of the olfactory gene repertoire in the pig genome. BMC Genomics201213:584 PMID: 23153364" display_name: PMID 23153364 name: Ngyuen_et_al_2012 release: ~ - description: Plant Reactome is a database of plant metabolic and regulatory pathways maintained by Gramene. This ID links to a Reaction in Plant Reactome. display_name: Plant Reactome Reaction ID name: Plant_Reactome_Reaction release: ~ - description: Plant Reactome is a database of plant metabolic and regulatory pathways maintained by Gramene. This ID links to a Pathway in Plant Reactome. display_name: Plant Reactome Pathway ID name: Plant_Reactome_Pathway release: ~ - description: The Committee on Gene Symbolization, Nomenclature and Linkage (CGSNL) of the Rice Genetics Cooperative has revised the gene nomenclature system for rice (Oryza) to take advantage of the completion of the rice genome sequence and the emergence of new methods for detecting, characterizing, and describing genes in the biological community (<A HREF="https://doi.org/10.1007/s12284-008-9004-9">McCouch 2008</A>). display_name: Committee on Gene Symbolization, Nomenclature and Linkage of the Rice Genetics Cooperative name: CGSNL release: ~ - description: The aim of Oryzabase is to create a comprehensive view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information (<a href="https://doi.org/10.1104/pp.105.063008">Yamazaki 2006</a>). display_name: Integrated Rice Science Database name: Oryzabase release: ~ - description: The Rice Annotation Project Database (RAP-DB) provides a comprehensive set of gene annotations for the genome sequence of rice, Oryza sativa (japonica group) cv. Nipponbare (<A HREF="https://dx.doi.org/10.1093%2Fpcp%2Fpcs183">Itoh 2013</A>). display_name: Rice Annotation Project Database name: RAP-DB release: ~ - description: ~ display_name: Gene names assigned by Gasser Lab name: Gasser_lab release: ~ - description: ~ display_name: Related identifier from previous versions of S. mansoni annotation name: Schisto_previous_id release: ~ - description: ~ display_name: WormBase CDS name: wormbase_cds release: ~ - description: http://bovinegenome.org display_name: BGD name: BGD release: ~ - description: ~ display_name: ENCODE name: ENCODE release: ~ - description: ~ display_name: KNETMINER_WHEAT name: KNETMINER_WHEAT release: ~ - description: ~ display_name: KNETMINER_ARA name: KNETMINER_ARA release: ~ - description: ~ display_name: KNETMINER_RICE name: KNETMINER_RICE release: ~ - description: ~ display_name: Wheat Expression name: WHEATEXP_GENE release: ~ - description: ~ display_name: Wheat Expression name: WHEATEXP_TRANS release: ~ - description: ~ display_name: External wheat gene names name: external_wheat_gene_names release: ~ - description: ~ display_name: PEATmoss Gene Model Lookup DB name: peatmoss_lookup release: ~ - description: ~ display_name: PEATmoss Expression Viewer name: peatmoss_expression release: ~ - description: http://www.cassavawhitefly.org/ display_name: Whitefly Genome Database name: ACWP release: ~ - description: Marking default seq region synonyms for BRC4. display_name: BRC4_seq_region_name name: BRC4_seq_region_name release: ~ - description: Initial sequence name submitted by the assembly provider to GenBank (raw/source names that are replaced by INSDC ids after publication) display_name: INSDC_submitted_name name: INSDC_submitted_name release: ~ - description: Direct mappings to UniProtKB isoforms display_name: UniProtKB isoform name: Uniprot_isoform release: ~ - description: BeeBase( https://hymenoptera.elsiklab.missouri.edu/beebase ) data source for the bee research community. Now part of the Hymenoptera Genome Database(HGD). display_name: BeeBase name: BEEBASE release: ~ - description: The Burton Lab, Scripps Institution of Oceanography, UCSD Marine Biology Research Division (https://burtonlab.weebly.com). display_name: BurtonLabUCSD name: BurtonLabUCSD release: ~ - description: Marine Invertebrate Models Database (https://marimba.obs-vlfr.fr) display_name: MARIMBA name: MARIMBA release: ~ - description: Data provided by the Liverpool John Moores University (https://www.ljmu.ac.uk). display_name: Liverpool John Moores University name: LJMU release: ~ - description: ~ display_name: Phytozome name: Phytozome release: ~ - description: ~ display_name: BananaGenomeHub name: BananaGenomeHub release: ~ - description: Data provided by the Liverpool John Moores University (https://www.ljmu.ac.uk) for translations. display_name: Liverpool John Moores University translations data name: LJMU_translation release: ~ - description: Data provided by Ensembl Metazoa for transcripts. display_name: Ensembl Metazoa transcripts data name: Ensembl_Metazoa_transcript release: ~ - description: GenBank translations data display_name: GenBank translations data name: GenBank_translation release: ~ - description: Data provided by Ensembl Metazoa for translations. display_name: Ensembl Metazoa translations data name: Ensembl_Metazoa_translation release: ~ - description: Data provided by the Liverpool John Moores University (https://www.ljmu.ac.uk) for transcripts. display_name: Liverpool John Moores University transcripts data name: LJMU_transcript release: ~ - description: GenBank transcripts data display_name: GenBank transcripts data name: GenBank_transcript release: ~ - description: ~ display_name: Submitter sequence name name: submitter_sequence_name release: ~ - description: Proteins from Lepbase display_name: Lepbase proteins name: Lepidoptera_proteomes release: ~ - description: ~ display_name: Ensembl Rat Transcript name: Ens_Rn_transcript release: ~ - description: Proteins from Uniprot [PE 1/2] and past ensembl release, PCG models based on the an old assembly of Anopheles atroparvus. display_name: Anopheles proteomes name: Atroparvus_proteomes release: ~ - description: The National Genomics Data Center (NGDC, https://ngdc.cncb.ac.cn), part of the China National Center for Bioinformation (CNCB). display_name: CNCB-NGDC name: CNCB_NGDC release: ~ - description: AphidBase is a reference information system providing genomic resources for the study of aphids (https://bipaa.genouest.org/is/aphidbase/). Part of the BIPAA platform (https://bipaa.genouest.org/is/) display_name: AphidBase name: APHIDBASE release: ~ - description: Proteins from Uniprot [PE 1/2] and past ensembl release, PCG models based on the an GCA_000262795.1 assembly of Phlebotomus papatasi display_name: Perniciosus proteomes name: Perniciosus_proteomes release: ~ - description: Data provided by the Roslin Institute, The University of Edinburgh ( https://www.ed.ac.uk/roslin/about) display_name: The Roslin Institute name: ROSLIN_INST release: ~ - description: A database of orthology relationships, functional annotation, and gene evolutionary histories (http://eggnog5.embl.de/) display_name: EggNOG name: EggNOG release: ~ - description: "MGnify: the microbiome analysis resource from EMBL-EBI (https://www.ebi.ac.uk/metagenomics/)" display_name: MGnify metagenomics data name: MGnify release: ~ - description: ~ display_name: Gene synonyms manually curated from the literature name: curated_gene_synonyms release: ~ - description: BRC4 Community Annotation data for transcripts display_name: BRC4 Community Annotation (Transcripts) name: BRC4_Community_Annotation_tr release: ~ - description: BRC4 Community Annotation data for translations display_name: BRC4 Community Annotation (Translations) name: BRC4_Community_Annotation_tn release: ~ - description: The i5k Workspace@NAL (https://i5k.nal.usda.gov/) is a platform for communities around ‘orphaned’ arthropod genome projects. The partner of the the i5k initiative project (http://i5k.github.io/). display_name: i5k Workspace at NAL name: I5KNAL release: ~ - description: ~ display_name: GeneCards name: GeneCards release: ~ - description: UniProtKB gene-centric reference proteome (GCRP) display_name: UniProtKB gene-centric reference proteome (Uniprot/GCRP) name: Uniprot/GCRP release: ~ - description: AlphaFold Protein Structure Database (https://alphafold.ebi.ac.uk/) -- EMBLs European Bioinformatics Institute (EMBL-EBI) provided database of protein 3D structures predicted by AI from DeepMind. (gene xref) display_name: AlphaFold Protein Structure Database name: AlphaFold_DB_gene release: ~ - description: DRscDB (https://www.flyrnai.org/tools/single_cell/web/) is a user-friendly, manually curated single-cell RNA-seq (scRNA-seq) search database based on datasets derived from published literature. DRscDB allows users to search, mine, and compare multiple genes and cell clusters across diverse species including Drosophila and Humans display_name: DRscDB -- manually curated single-cell RNA-seq search database name: DRscDB release: ~ - description: AlphaFold Protein Structure Database (https://alphafold.ebi.ac.uk/) -- EMBLs European Bioinformatics Institute (EMBL-EBI) provided database of protein 3D structures predicted by AI from DeepMind. display_name: AlphaFold Protein Structure Database name: AlphaFold_DB release: ~ - description: UniProtKB gene-centric reference proteome (UniProt/GCRP), gene xref display_name: UniProtKB gene-centric reference proteome (UniProt/GCRP) name: Uniprot/GCRP_gene release: ~ - description: Ensembl Bacteria identifiers (including imported with missing source) display_name: Ensembl Bacteria name: Ensembl_Bacteria release: ~ - description: ~ display_name: FlyBase annotation for transcript name: flybase_annot_id_transcr release: ~ - description: ~ display_name: FlyBase annotation for translation name: flybase_annot_id_transl release: ~ - description: ~ display_name: FlyBase annotation name: flybase_annot_id release: ~ - description: transcript name from RNAmmer display_name: RNAmmer transcript name name: RNAMMER_trans_name release: ~ - description: transcript name from tRNAScan-SE display_name: tRNAScan-SE transcript name name: TRNASCAN_SE_trans_name release: ~ - description: transcript name from ENA display_name: European Nucleotide Archive transcript name name: ENA_GENE_trans_name release: ~ - description: transcript name from external wheat display_name: External wheat transcript names name: external_wheat_gene_names_trans_name release: ~ - description: transcript name from Oryzabase display_name: Integrated Rice Science Database transcript name name: Oryzabase_trans_name release: ~ - description: transcript name from RFAM display_name: RFAM transcript name name: RFAM_GENE_trans_name release: ~ - description: transcript name from RAP-DB display_name: Rice Annotation Project Database transcript name name: RAP-DB_trans_name release: ~ - description: transcript name from Phytozome display_name: Phytozome transcript name name: Phytozome_trans_name release: ~ - description: Pan gene identifiers from the rice Pan Oryza project. display_name: Rice Pan Gene Identifiers name: rice_pan_genes release: ~ - description: ~ display_name: PubMed Publications for transcript name: PUBMED_tr release: ~